Sachs {gss}R Documentation

Protein Expression in Human Immune System Cells

Description

Data concerning protein expression levels in human immune system cells under stimulations.

Usage

data(Sachs)

Format

A data frame containing 7466 cells, with flow cytometry measurements of 11 phosphorylated proteins and phospholipids, on the log10 scale of the original.

praf Raf phosphorylated at S259.
pmek Mek1/mek2 phosphorylated at S217/S221.
plcg Phosphorylation of phospholipase C-γ on Y783.
pip2 Phophatidylinositol 4,5-biphosphate.
pip3 Phophatidylinositol 3,4,5-triphosphate.
p44.42 Erk1/erk2 phosphorylated at T202/Y204.
pakts473 AKT phosphorylated at S473.
pka Phosphorylation of of protein kinase A substrates on 3 sites.
pkc Phosphorylation of of protein kinase C substrates on S660.
p38 Erk1/erk2 phosphorylated at T180/Y182.
pjnk Erk1/erk2 phosphorylated at T183/Y185.

Source

Sachs, K., Perez, O., Pe'er, D., Lauffenburger, D. A., and Nolan, G. P. (2005), Causal protein-signaling networks derived from multiparameter single-cell data. Science, 308 (5732), 523–529.


[Package gss version 2.0-10 Index]